Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs291360 | chr1:235685670 | C/T | 0.00063 | 210 | 17.03 | 16.93 | 13.17 | KM Plot |
| KIRP | rs291366 | chr1:235690780 | C/T | 0.000354 | 209 | 18.03 | 16.73 | 13.07 | KM Plot |
| KIRP | rs291377 | chr1:235695186 | C/T | 8.02E-5 | 214 | 10.08 | 16.5 | 17.17 | KM Plot |
| KIRP | rs2938229 | chr8:30094947 | A/G | 0.000101 | 211 | 14.8 | 18.98 | 9 | KM Plot |
| KIRP | rs2941052 | chr11:34890131 | G/T | 0.000378 | 214 | 16.93 | 14.83 | 13.3 | KM Plot |
| KIRP | rs2958740 | chr8:30092734 | G/A | 9.03E-5 | 213 | 4.67 | 19.5 | 14.8 | KM Plot |
| KIRP | rs2958742 | chr8:30091463 | T/C | 9.03E-5 | 213 | 4.67 | 19.5 | 14.8 | KM Plot |
| KIRP | rs2958746 | chr8:30089070 | C/T | 9.03E-5 | 212 | 4.67 | 19.5 | 15.07 | KM Plot |
| KIRP | rs3018734 | chr11:61211286 | A/G | 1.35E-6 | 208 | 4.97 | 14.1 | 16.47 | KM Plot |
| KIRP | rs3045983 | chr5:79950741 | GCCCCCAGCT/G | 0.000115 | 211 | 18.65 | 14.85 | 9.77 | KM Plot |
| KIRP | rs3047288 | chr6:26376314 | A/G | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs3071936 | chr1:95281047 | A/AGCTGGGC | 1.8E-7 | 209 | 11.2 | 14.87 | 16.53 | KM Plot |
| KIRP | rs3071938 | chr1:95281044 | C/CAGTATTG | 1.8E-7 | 209 | 11.2 | 14.87 | 16.53 | KM Plot |
| KIRP | rs3088070 | chr10:75530013 | C/T | 0 | 213 | 16.5 | 15.07 | 2.47 | KM Plot |
| KIRP | rs3118164 | chr10:26953432 | A/C | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |